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Table 1 Point mutations in different gene loci of P. luminescens 1° and 2° clones identified by HTS. Sample ID 1 indicates 1° cells and 2 indicates 2° cells of P. luminescens. A–F indicate the 6 different replicates of each tested phenotypic variant. The info indicates the sum of the coverage with the reference genome (n1), the number of matches with the covered region (n2), and the number of occurring SNPs within n1 (n3) represented as n1:n2:n3

From: High-throughput sequencing analysis reveals genomic similarity in phenotypic heterogeneous Photorhabdus luminescens cell populations

Position of the mutation

Base exchange

AA change

Sample ID

Info

Gene name

30026

G > A

Ala > Val

1B

33:22:11

PluDJC_00175

30026

G > A

Ala > Val

2E

36:26:10

PluDJC_00175

30038

A > G

Met > Thr

1B

33:25:8

PluDJC_00175

30038

A > G

Met > Thr

2E

37:26:11

PluDJC_00175

287646

T > C

2E

24:17:7

PPlu_DJC01390

609596

C > A

Ala > Glu

1A

43:0:43

PluDJC_15370

609596

C > A

Ala > Glu

1F

22:15:7

PluDJC_15370

609596

C > A

Ala > Glu

2C

29:21:9

PluDJC_15370

3433543

C > T

Ser > Asn

1E

34:27:7

PluDJC_15455

3433543

C > T

Ser > Asn

2D

29:21:7

PluDJC_15455

3433563

C > T

Ala > Ala

2D

30:23:7

PluDJC_15455

3433570

T > C

Glu > Ala

1B

29:22:7

PluDJC_15455

3433570

T > C

Glu > Ala

2D

28:20:8

PluDJC_15455

3433581

T > C

Thr > Thr

1E

31:24:7

PluDJC_15455

3433581

T > C

Thr > Thr

2D

30:22:8

PluDJC_15455

3433581

T > C

Thr > Thr

2A

30:23:7

PluDJC_15455

3433584

T > C

Leu > Leu

1E

27:20:7

PluDJC_15455

3433584

T > C

Leu > Leu

2D

31:23:8

PluDJC_15455

4487898

A > G

Glu > Gly

2A

40:40:0

PluDJC_19710 (rpoD)

4487898

A > G

Glu > Gly

2B

37:37:0

PluDJC_19710 (rpoD)

4487898

A > G

Glu > Gly

2F

23:23:0

PluDJC_19710 (rpoD)

4513459

C > A

2D

62:62:0

PPluDJC_19885

4841989

C > T

Gly > Arg

2C

45:45:0

PluDJC_21265