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Table 3 Phenotypic and genotypic antibiotic resistance patterns of E. coli O157:H7+/H7- cattle and wastewater isolates

From: Phenotypic and genotypic antibiotic resistance profiles of Escherichia coli O157 from cattle and slaughterhouse wastewater isolates

Straina

n

Seasonb

Agec

Breedd

Gendere

Phenotypic antibiotic resistance patternsg

Genotypic antibiotic resistance patterns

 

I

R

 

Cattle isolates

 3R (A-C)

3

S

Y

N

M

AUG, KF, CRO, K, CIP, NOR, C

AMP, FOX, S, TE, SMX,TM

tetA, tetC, sulI

 3 K (A,C,D,E)

4

S

Y

N

M

AUG, KF, CRO, K, CIP, NOR, C

AMP, FOX, S, TE, SMX,TM

tetA, tetC, sulI

 19R (A-E)h,i

5

S

Y

C1

M

 

AMP, TE, SMX, TM

tetA, sulI

 25 K (A-C)f,h

3

S

Y

C2

M

   

 34R (A-E)

5

S

Y

C1

M

KF

  

 36 K (A-C)

3

S

O

N

F

KF

  

 44R (A-D)

4

W

O

Cr

F

   

 44 K (A-E)

5

W

O

Cr

F

   

 68R (A, B)

2

W

Y

C1

M

   

 69R (A-E)

5

W

Y

Cr

M

   

 91 K (A-D)

4

W

Y

N

M

   

 120R (A-C)

3

S

Y

Cr

F

   

 120 K (A,B,D,E)

4

S

Y

Cr

F

KF

  

 120 K (C)

1

S

Y

Cr

F

   

 135R (A-D)

4

S

Y

C1

M

   

 143R (A-E)

5

S

M

Cr

M

KF

  

 143 K (A-D)

4

S

M

Cr

M

   

 163 K (A-E)

5

W

M

N

F

 

TE, SMX

tetB, strA

 168 K (A-E)

5

W

Y

C3

M

  

strB

 210K(B)h,i

1

W

M

C3

F

AMP, KF

TE

tetA, sulI

 219R (A-C)

3

W

Y

Cr

M

KF

AMP, TE, SMX, TM

 

 236 K (B)h

1

S

O

N

F

AUG

KF, FOX

 

 236 K (E)

1

S

O

N

F

AUG

KF, FOX

 

Wastewater isolates

 M1 (A)

1

    

AMP, AUG, CRO, K, TOB, CIP, NOR

KF, FOX, CEC, ATM, S, TE, NA, SMX, TM, C

tetC

 M1 (C, D, E)h

3

    

AMP, AUG, CRO, K, TOB, CIP, NOR

KF, FOX, CEC, ATM, S, TE, NA, SMX, TM, C

tetC

 M14 (A-D)h

4

    

KF, FOX

C

 

 M17 (A-E)

5

    

KF

  

 M18 (A-E)

5

    

KF

  

 M21 (A,C,D,E)h

4

      

tetC

  1. a Sampled cattle number; sample (R, rectoanal mucosal swab; K, carcass sponge); A-E, colony code. b S, Warm months (May-October); W, Cold months (November-April).
  2. c Y, Young (Y ≤ 24 months); M, Mature (24 months < M ≤ 4 years,; O: Old (4 years < O). d C, Culture (C1, Holstein; C2. Brown Swiss; C3, Simmental); Cr, Crossbred; N, Native (Anatolian Black). e M, Male; F, Female. f Sorbitol fermentative colonies on CT-SMAC (Ayaz et al. 2014). g I, Intermediate resistant; R, Resistant. h non-Shiga toxigenic isolates. i E. coli O157:H7- isolates