Table 5 Cazy profile of Oceanimonas sp. GK1 genome
Category | CAZy family | Number of sequences | Oceanimonas sp. GK1 locus | Reference accession no. | In silico prediction |
|---|---|---|---|---|---|
Glycosyl hydrolases (GHs) | GH3 | 2 | GU3_02110 | AEY00179.1 | β-Glucosidase |
GU3_09135 | AEY01583.1 | Glycoside hydrolase | |||
GH8 | 1 | GU3_14400 | AEY02633.1 | Endo-1,4-D-glucanase | |
GH23 | 5 | GU3_06630 | AEY01082.1 | Membrane-bound lytic transglycosylase F | |
GU3_06750 | AEY01106.1 | Soluble lytic murein transglycosylase | |||
GU3_06765 | AEY01109.1 | Membrane-bound lytic murein transglycosylase D | |||
GU3_13515 | AEY02456.1 | Transcriptional regulatory protein (Lytic transglycosylase) | |||
GU3_13925 | AEY02538.1 | Membrane-bound lytic murein Mtransglycosylase | |||
GH73 | 1 | GU3_13535 | AEY02460.1 | Flagellar rod assembly protein/muramidase FlgJ | |
GH103 | 2 | GU3_08825 | AEY01521.1 | Lytic murein transglycosylase | |
GU3_06125 | AEY00981.1 | Lytic murein transglycosylase B | |||
Glycosyl transferase family (GTs) | GT2 | 5 | GU3_03185 | AEY00394.1 | Glycosyl transferase |
GU3_06865 | AEY01129.1 | Glycosyl transferase | |||
GU3_12835 | AEY02322.1 | Glycosyltransferase | |||
GU3_14410 | AEY02635.1 | Cellulose synthase catalytic subunit | |||
GU3_14775 | AEY02708.1 | Glycosyl transferase | |||
GT4 | 4 | GU3_03225 | AEY00402.1 | Predicted xylanase/chitin deacetylase | |
GU3_14710 | AEY02695.1 | Glycosyl transferase group 1 | |||
GU3_14745 | AEY02702.1 | Mannosyltransferase B | |||
GU3_12815 | AEY02318.1 | Glycosyltransferase | |||
GT9 | 4 | GU3_03180 | AEY00393.1 | ADP-heptose:LPS heptosyltransferase | |
GU3_03190 | AEY00395.1 | ADP-heptose--LPS heptosyltransferase III | |||
GU3_03210 | AEY00399.1 | Lipopolysaccharide heptosyltransferase II | |||
GU3_03215 | AEY00400.1 | Lipooligosaccharided-glycero-D-manno-heptosyltransferase | |||
GT19 | 1 | GU3_12925 | AEY02338.1 | Lipid-A-disaccharide synthase | |
GT28 | 1 | GU3_04370 | AEY00631.1 | Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | |
GT30 | 1 | GU3_03205 | AEY00398.1 | 3-Deoxy-D-manno-octulosonic-acid transferase | |
Glycosyl transferase family (GTs) | GT32 | 1 | GU3_03110 | AEY00379.1 | Mannosyltransferase OCH1 |
GT51 | 3 | GU3_03845 | AEY00526.1 | Penicillin-binding protein 1B | |
GU3_09545 | AEY01665.1 | Monofunctional biosynthetic peptidoglycan transglycosylase | |||
GU3_14970 | AEY02747.1 | Penicillin-binding protein 1A | |||
GTnc | 1 | GU3_14780 | AEY02709.1 | Hypothetical protein | |
Carbohydrate esterases (CEs) | CE4 | 2 | GU3_03225 | AEY00402.1 | Predicted xylanase/chitin deacetylase |
GU3_15815 | AEY02914.1 | Putative urate catabolism protein | |||
CE9 | 1 | GU3_11925 | AEY02140.1 | N-Acetylglucosamine-6-phosphate deacetylase | |
CE11 | 1 | GU3_04400 | AEY00637.1 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | |
CEnc | 1 | GU3_14835 | AEY02720.1 | S-Formylglutathione hydrolase | |
Carbohydrate binding modules (CBMs) | CBM50 | 6 | GU3_00055 | AEX99767.1 | LysM domain-containing protein |
GU3_05400 | AEY00837.1 | N-Acetylmuramoyl-L-alanine amidase | |||
GU3_15095 | AEY02772.1 | Lipoprotein NlpD | |||
GU3_06765 | AEY01109.1 | Membrane-bound lytic murein transglycosylase D |