Table 1 Identification of 28 endophytic fungi of Vitis labrusca based on rRNA sequencing and inhibition percentages (IP) and competitive interactions (CI) with three phytopathogenic fungi in dual culture
From: Bioprospecting foliar endophytic fungi of Vitis labrusca Linnaeus, Bordô and Concord cv.
Endophytic fungi | Closely related fungal sequences | Maximal identity | Phytopathogenic fungi | |||||
|---|---|---|---|---|---|---|---|---|
Alternaria | Sphaceloma | Glomerella | ||||||
IP* | CI** | IP | CI | IP | CI | |||
B14-69 | Uncultured fungus (GU053859.1) | 99 % | 22.80 f | A | 27.64 d | A | 44.44 c | A |
Cochliobolus sativus (JQ936204.1) | 99 % | |||||||
B15-03 | Fungal endophyte (JX155973.1) | 99 % | 37.42 c | A | 31.82 c | A | 37.94 d | A |
Phomopsis sp. (KF159989.1) | 98 % | |||||||
B17-49 | Sordariomycetes (JX174146.1) | 99 % | 39.34 c | A | 42.79 b | A | 63.95 a | A |
B27-116 | Sordariomycetes (JX174146.1) | 98 % | 22.94 f | A | 11.44 f | A | 15.19 f | A |
B28-47 | Phomopsis sp. (JN153054.1) | 99 % | 25.93 e | B | 26.33 d | B | 32.33 e | A |
B30-122 | Fungal endophyte (KF435373.1) | 99 % | 31.46 d | A | 32.60 c | A | 47.40 c | A |
Phomopsis sp. (GQ461582.1) | 99 % | |||||||
B31-38 | Phoma herbarum (KJ767079.1) | 99 % | 37.63 c | CA1 | 17.45 e | A | 36.47 d | A |
B33-61 | Bipolaris sp. (GU017499.1) | 98 % | 21.03 g | A | 25.55 d | A | 37.65 d | A |
B35-107 | Sordariomycetes (JX174146.1) | 99 % | 20.39 g | A | 33.65 c | A | 37.65 d | A |
B40-119 | Fungal endophyte (KF435617.1) | 97 % | 23.37 f | A | 34.69 c | A | 30.85 e | A |
Diaporthe sp. (EF423554.2) | 98 % | |||||||
B43-48 | Phomopsis sp. (GQ461582.1) | 99 % | 25.93 e | A | 38.61 b | A | 45.92 c | A |
B45-62 | Phomopsis sp. (JN153062.1) | 99 % | 35.29 c | A | 14.05 f | A | 15.48 f | A |
B46-95 | Phoma sp. (KJ572232.1) | 100 % | 47.85 b | A | 33.65 c | CA1 | 53.01 b | A |
B60-132 | Bipolaris sp. (GU017499.1) | 99 % | 22.73 f | A | 33.13 c | A | 42.97 c | A |
B61-72 | Fungal endophyte (JN163857.1) | 97 % | 24.01 f | CA1 | 12.79 f | A | 45.33 c | A |
Phoma herbarum (JX867222.1) | 99 % | |||||||
B63-34 | Sordariomycetes (JX174146.1) | 97 % | 35.72 c | CA1 | 29.21 d | A | 65.72 a | A |
B64-46 | Sordariomycetes (JX174146.1) | 100 % | 31.67 d | A | 43.57 b | A | 47.70 c | A |
C03-45 | Fusarium culmorum (KC311482.1) | 99 % | 26.78 c | CA1 | 44.36 b | CA1 | 60.70 b | CA1 |
C07-137 | Phoma exigua (AY531684.1) | 99 % | 21.88 e | B | 10.66 d | A | 37.06 e | A |
C16-83 | Uncultured soil fungus (EU479850.1) | 98 % | 18.69 e | CA1 | 16.93 d | A | 37.94 e | A |
Alternaria sp. (KJ935016.1) | 97 % | |||||||
C18-40 | Phoma herbarum (KJ767079.1) | 99 % | 21.03 e | CA1 | 9.61 d | A | 49.47 d | A |
C19-144 | Uncultured fungus (GU053874.1) | 99 % | 19.75 e | CA1 | 14.31 d | A | 39.12 e | A |
Cochliobolus sp. (JQ754043.1) | 98 % | |||||||
C21-69 | Alternaria alternata (KJ410038.1) | 98 % | 19.54 e | A | 11.71 d | A | 37.95 e | A |
C22-22 | Fusarium oxysporum (FJ867936.1) | 99 % | 24.44 d | CA1 | 12.23 d | A | 53.01 c | A |
C25-19 | Diaporthe longicolla (JQ753971.1) | 99 % | 31.20 b | A | 17.4 n | A | 52.13 c | A |
C27-07 | Sordariomycetes (JX174146.1) | 98 % | 30.82 b | A | 33.65 c | CA1 | 63.65 b | A |
C40-59 | Sordariomycetes (JX174146.1) | 99 % | 26.56 c | A | 39.92 b | CA1 | 58.33 b | A |
C53-134 | Sordariomycetes (JX174146.1) | 99 % | 27.20 c | CA1 | 25.55 c | A | 36.17 e | A |