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Table 2 Characteristics distinguishing tested isolates

From: Diversity and symbiotic divergence of endophytic and non-endophytic rhizobia of Medicago sativa

Distinctive characteristics

Groupsa and their reactions

A (10)b

B (2)

C (8)

D (1)

E (9)

F (2)

Application of sole carbon and nitrogen source (1%)

 D-Fructose

+c (9)d

+

+(7)

+

+

+

 L-tryptophan

+(6)

+(1)

+(4)

–

+(2)

–

 Glycine

+

+

+(5)

–

+(1)

–

 Arginine

+

+

+

–

+(4)

+

 L-Histidine

+

+

+

–

+(3)

+

 Phenylalanine

+

+

+(7)

–

+(2)

–

Tolerance to dyes (1%)

 Bromothymol blue

+

+

+

+

+

+(1)

 Methyl red

+(8)

+(1)

+

+

+

+(1)

 Bromphenol blue

+(9)

+

+(6)

+

+

+

 Methylene blue

+

+

+(4)

–

+(6)

–

 Malachite green

+

+

+

+

+(7)

+

Tolerance to NaCl (%), pH, temperature (°C)

 NaCl (6%)

+(5)

+

+(2)

–

+(1)

+

 pH 11.0

+

+

+(5)

+

+

–

 8 °C

+(9)

+

+(1)

–

+(1)

–

 37 °C

+

+

+

–

+

+

 40 °C

+

+(1)

+

–

+

+

Tolerance to antibiotics

 Erythromycin [b]e

+

+

+

–

+(8)

–

 Erythromycin [c]

+(9)

+

+(2)

–

+(7)

–

 Erythromycin [d]

+(3)

+

–

–

+(1)

–

 Chloromycetin [d]

+(9)

+

+

–

+

+(1)

 Kanamycin [a]

+(9)

+

+

+

+

–

 Kanamycin [b]

+(3)

–

+(1)

–

+

–

Tolerance to antibiotics

 Kanamycin [c]

+(4)

+

–

–

+(7)

–

 Kanamycin [d]

+(4)

+(1)

–

–

+(8)

–

 Ampicillin [b]

+

+

+(7)

+

+

–

 Ampicillin [c]

+(9)

+

+(4)

+

+

–

 Ampicillin [d]

+

+

+(7)

+

+

–

 Neomycin [a]

+

+

+

+

+

+(1)

 Neomycin [b]

+

+(1)

+(1)

+

+

–

 Neomycin [c]

+(9)

+

+(4)

+

+

+(1)

 Neomycin [d]

+(7)

+

+(3)

+

+

+(1)

 Streptomycin [a]

+

+

+(6)

+

+

+

 Streptomycin [b]

+(6)

+

+(3)

+

+(6)

+

 Streptomycin [c]

+(9)

+

+(7)

+

+

+

 Streptomycin [d]

+(9)

+

+(6)

+

+

+(1)

 Gentamycin [a]

+(9)

+

+(7)

+

+

–

 Gentamycin [b]

+(4)

+

–

–

+

–

 Gentamycin [c]

–

+

–

–

+

–

 Gentamycin [d]

–

+(1)

–

–

+(6)

–

Others

 Amylolysis

+

–

+(3)

+

+(7)

+

 Gelatin hydrolysis

+(8)

–

+(6)

–

+(4)

+(1)

 Voges-Proskauer test

+(5)

–

–

–

–

–

 Indole production

+(3)

–

+(5)

–

+(4)

–

 BTB acid production

+

+(1)

+

+

+

–

 Citrate utilization

+

–

+(3)

–

+(2)

–

 3-Keto-lactose production

+(1)

–

+(2)

–

+(1)

–

 Phosphate solubilization

+

+

+(6)

–

+(2)

–

 Indole-3-acetic acid (IAA) production

+(6)

–

+(3)

+

+(3)

–

  1. aCluster analysis of phenotypic features identified six groups (A–F) at 73% similarity
  2. bNumber of isolates in the group
  3. ca–d mean the concentration of antibiotics is 5, 50, 100, and 300 μg mL−1, respectively
  4. d+ Strains were positive, − strains were negative;
  5. eNumber of reactions in which strains were positive