Table 2 L. plantarum D31 and T9 genome statistics
Feature | L. plantarum D31 | L. plantarum T9 | ||
|---|---|---|---|---|
Value | Percentage of total | Value | Percentage of total | |
Genome size (bp) | 3,315,786 | 100.00 | 3,388,070 | 100.00 |
DNA coding (bp) | 2,777,217 | 83.76 | 2,788,032 | 82.29 |
DNA G + C (bp) | 1,474,530 | 44.47 | 1,494,478 | 44.11 |
DNA scaffold | 72 | Â | 158 | Â |
Total gene | 3251 | 100.00 | 3515 | 100.00 |
Protein-coding gene | 3106 | 95.54 | 3223 | 91.69 |
RNA gene | 48 | 1.48 | 77 | 2.19 |
Pseudo gene | 97 | 2.98 | 215 | 6.12 |
Genes with function prediction | 2450 | 75.36 | 2590 | 73.68 |
Genes assigned to COG | 1896 | 58.32 | 1935 | 55.05 |
Genes with Pfam domain | 2530 | 77.82 | 2578 | 73.34 |
Genes with signal peptide | 138 | 4.24 | 143 | 4.07 |
Genes with transmembrane helices | 845 | 25.99 | 876 | 24.92 |
CRISPR repeat | 1 | Â | 1 | Â |
Intact prophage | 1 | Â | 2 | Â |