Bacterial community characterization of the rhizobiome of plants belonging to Solanaceae family cultivated in desert soils

Table 1 Sequencing reads generated, filtered for the quality control (Q ≥ 33), and assembled with a minimum identity of 98%, for comparison against the GenBank non-redundant database using Megablast

Samples	Reads	QC 33	Classified (%)	Unclassified (%)
C. annuum
CCR	476624	416578	88.67	11.33
CCSR	94578	81808	91.76	8.24
CCS	1246008	129392	74.98	25.02
CMR	171288	150112	96.81	3.19
CMSR	91774	80626	96.13	3.87
CMS	116478	103222	98.73	1.27
CTR	223200	196626	79.6	20.4
CTSR	192752	169662	98.64	1.36
CTS	212736	188698	90.63	9.37
S. lycopersicum
TMR	192064	167744	82.48	17.52
TMSR	76236	69698	87.57	2.43
TMS	159230	150390	92.9	7.1
TPR	131974	123956	48	52
TPSR	67318	64358	99.45	0.55
TPS	174164	163012	92.16	7.84
TLR	84630	78984	40.94	59.06
TLSR	82800	78432	99.25	0.75
TLS	227010	213424	86.63	13.37

CCR chili pepper, Comitán endophytic root; CCSR chili pepper, Comitán, rhizosphere; CCS chili pepper, Comitán, rhizoplane; CMR chili pepper, La Matanza, endophytic root; CMSR chili pepper, La Matanza, rhizosphere; CMS chili pepper, La Matanza, rhizoplane; CTR chili pepper, Todos Santos, endophytic root; CTSR chili pepper, Todos Santos, rhizosphere; CTS chili pepper, Todos Santos, rhizoplane; TMR tomato, La Matanza, endophytic root; TMSR tomato, La Matanza, rhizosphere; TMS tomato, La Matanza, rhizoplane; TPR tomato, Pescaderos, endophytic root; TPSR tomato, Pescaderos, rhizosphere; TPS tomato, Pescaderos, rhizoplane; TLR tomato, Los Planes, endophytic root; TLSR tomato, Los Planes, rhizosphere; TLS tomato, Los Planes, rhizoplane

ISSN: 1869-2044