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Table 2 The denitrification related genes in COG database

From: The complete genome sequence of the archaeal isolate Halomicrobium sp. ZPS1 reveals the nitrogen metabolism characteristics under hypersaline conditions

 

Identity (%)

E value

COG gene ID

Functional description

Functional class

Class description

ZPS1 GM001562

100

0.00E+00

YP 003176769

Nitrate reductase gamma subunit

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM002221

47.9

1.40E−96

YP 008376898

Nitrate/nitrite transporter NarK

P

Inorganic ion transport and metabolism

ZPS1 GM003113

100

1.00E−223

YP 003178284

Nitrate reductase beta subunit

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM003113

100

1.00E−223

YP 003178284

Nitrate reductase beta subunit

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM003114

100

0.00E+00

YP 003178285

Nitrate reductase alpha subunit

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM000464

45.9

5.20E−07

YP 007284710

Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase

PQ

Inorganic ion transport and metabolism

Secondary metabolites biosynthesis, transport and catabolism

ZPS1 GM000538

100

9.60E−77

YP 003178896

Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase

PQ

Inorganic ion transport and metabolism

Secondary metabolites biosynthesis, transport, and catabolism

ZPS1 GM001048

100

7.90E−97

YP 003176228

Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase

PQ

Inorganic ion transport and metabolism

Secondary metabolites biosynthesis, transport, and catabolism

ZPS1 GM002618

100

0.00E+00

YP 003177800

Nitric oxide reductase large subunit

P

Inorganic ion transport and metabolism

ZPS1 GM001012

100

6.60E−102

YP 003176191

Nitrous oxide reductase accessory protein NosL

P

Inorganic ion transport and metabolism

ZPS1 GM001342

100

2.10E−261

YP 003176547

Glutamine synthetase

E

Amino acid transport and metabolism

ZPS1 GM000568

100

3.10E−235

YP 003178926

Glutamate dehydrogenase/leucine dehydrogenase

E

Amino acid transport and metabolism

ZPS1 GM000588

100

6.00E−239

YP 003178946

Glutamate dehydrogenase/leucine dehydrogenase

E

Amino acid transport and metabolism

ZPS1 GM000589

100

0.00E+00

YP 003178947

Glutamate synthase domain 3

E

Amino acid transport and metabolism

ZPS1 GM001552

100

1.50E−253

YP 003176759

Ammonia channel protein AmtB

P

Inorganic ion transport and metabolism

ZPS1 GM000021

100

2.50E−251

YP 003178383

Na+-dependent transporter, SNF family

R

General function prediction only

ZPS1 GM000159

99.7

7.80E−187

YP 003178520

ABC-type Na+ efflux pump, permease component

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM000311

100

1.30E−180

YP 003178669

Multisubunit Na+/H+ antiporter, MnhE subunit

P

Inorganic ion transport and metabolism

ZPS1 GM000312

100

1.30E−42

YP 003178670

Multisubunit Na+/H+ antiporter, MnhF subunit

P

Inorganic ion transport and metabolism

ZPS1 GM000313

100

6.40E−55

YP 003178671

Multisubunit Na+/H+ antiporter, MnhG subunit

P

Inorganic ion transport and metabolism

ZPS1 GM000315

100

7.20E−81

YP 003178673

Multisubunit Na+/H+ antiporter, MnhB subunit

P

Inorganic ion transport and metabolism

ZPS1 GM000316

99.2

3.50E−59

YP 003178674

Multisubunit Na+/H+ antiporter, MnhC subunit

P

Inorganic ion transport and metabolism

ZPS1 GM000318

100

0.00E+00

YP 003178676

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit

CP

Energy production and conversion

Inorganic ion transport and metabolism

ZPS1 GM000779

100

1.10E−262

YP 003175955

Na+-dependent transporter, SNF family

R

General function prediction only

ZPS1 GM001320

100

4.10E−279

YP 003176524

Na+-driven multidrug efflux pump

V

Defense mechanisms

ZPS1 GM003089

100

2.20E−158

YP 003178260

Predicted Na+-dependent transporter

R

General function prediction only

ZPS1 GM001370

100

0.00E+00

YP 003176577

Trk K+ transport system, NAD-binding component

P

Inorganic ion transport and metabolism

ZPS1 GM002514

99.8

1.10E−293

YP 003177697

Trk-type K+ transport system, membrane component

P

Inorganic ion transport and metabolism