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Table 9 Identified DPB isolates from leachates grown with different crops using partial 16S rRNA sequences

From: The effect of crop species on DNase-producing bacteria in two soils

Phylum

DPBb Isolate ID

Genus

Species

Identity (%)c

GenBank Closest NCBI database match (Accession no.)

GenBank Accession no.

Treatment

Expd

Actinobacteria (20%)a

49-15SL

Microbacterium

M. azadirachtae

97

LC177121.1

MN294656

Soil

2

50-15SL

 

M. azadirachtae

100

MH489019.1

MN294657

Soil

2

 

52-15A

 

M. azadirachtae

98

MH489019.1

MN294659

Alfalfa

2

 

53-15A

 

M. azadirachtae

98

MH489019.1

MN294660

Alfalfa

2

 

66-15SY

 

M. azadirachtae

99

MH489019.1

MN294673

Soybean

2

 

70-15SY

 

M. azadirachtae

97

MH489019.1

MN294677

Soybean

2

 

71-15W

 

M. azadirachtae

97

MH489019.2

MN294678

Wheat

2

 

58-15C

 

M. foliorum

99

CP041040.1

MN294665

Canola

2

 

73-15W

 

M. foliorum

97

KF803585.1

MN294680

Wheat

2

 

74-15W

 

M. foliorum

99

MG195155.1

MN294681

Wheat

2

 

51-15A

 

M. oxydans

97

MF767919.1

MN294658

Alfalfa

2

 

55-15A

 

M. oxydans

99

MF767919.1

MN294662

Alfalfa

2

 

56-15C

 

M. oxydans

99

MF767919.1

MN294663

Canola

2

 

57-15C

 

M. paraoxydans

85

KX280770.1

MN294664

Canola

2

Bacteroidetes (12%)a

62-15C

Chryseobacterium

C. lathyri

99

KU924001.1

MN294669

Canola

2

67-15SY

 

C. oranimense

99

NR_044168.1

MN294674

Soybean

2

 

68-15SY

 

C. oranimense

96

NR_044168.1

MN294675

Soybean

2

 

72-15W

 

C. oranimense

98

NR_044168.1

MN294679

Wheat

2

 

48-15SL

 

C. taihuense

95

KT719933.1

MN294655

Soil

2

 

69-15SY

Flavobacterium

F. ginsengiterrae

96

NR_132661.1

MN294676

Soybean

2

 

65-15C

Nubsella

N. zeaxanthinifaciens

98

NR_114146.1

MN294672

Canola

2

 

46-15SL

 

N. zeaxanthinifaciens

96

NR_114146.1

MN294653

Soil

2

Firmicutes (54%)a

5-14SY

Bacillus

B. cereus

97

MG205787.1

MN294616

Soybean

1

12-14W

 

B. cereus

97

KU721999.1

MN294622

Wheat

1

 

14-14W

 

B. cereus

99

MG205902.1

MN294623

Wheat

1

 

21-14A

 

B. cereus

100

MN232174.1

MN294630

Alfalfa

1

 

22-14A

 

B. cereus

98

KF725719.1

MN294631

Alfalfa

1

 

41-14C

 

B. cereus

96

KX350001.1

MN294648

Canola

1

 

42-14C

 

B. cereus

94

KF500919.1

MN294649

Canola

1

 

43-14C

 

B. cereus

98

KJ473716.1

MN294650

Canola

1

 

44-14C

 

B. cereus

99

MF988724.1

MN294651

Canola

1

 

59-15C

 

B. muralis

99

EU977778.1

MN294666

Canola

3

 

1-14SY

 

B. mycoides

97

KU160370.1

MN294613

Soybean

1

 

4-14SY

 

B. mycoides

99

KU160370.1

MN294615

Soybean

1

 

9-14SY

 

B. mycoides

97

KU160370.1

MN294619

Soybean

1

 

11-14W

 

B. mycoides

97

MK217082.1

MN294621

Wheat

1

 

17-14W

 

B. mycoides

94

CP020743.1

MN294626

Wheat

1

 

18-14W

 

B. mycoides

100

KU160370.1

MN294627

Wheat

1

 

20-14A

 

B. mycoides

100

MK883205.1

MN294629

Alfalfa

1

 

26-14A

 

B. mycoides

100

KU160370.1

MN294634

Alfalfa

1

 

33-14C

 

B. mycoides

95

KU160370.1

MN294640

Canola

1

 

34-14C

 

B. mycoides

100

KJ528876.1

MN294641

Canola

1

 

36-14C

 

B. mycoides

100

KU160370.1

MN294643

Canola

1

 

37-14C

 

B. mycoides

100

KU160370.1

MN294644

Canola

1

 

39-14C

 

B. mycoides

97

KU160370.1

MN294646

Canola

1

 

40-14C

 

B. mycoides

99

KJ528876.1

MN294647

Canola

1

 

45-14C

 

B. pumilus

96

MK491041.1

MN294652

Canola

1

 

32-14SL

 

B. simplex

97

KX866680.1

MN294639

Soil

1

 

47-15SL

 

B. simplex

98

FN435888.1

MN294654

Soil

2

 

60-15C

 

B. simplex

96

FN435888.1

MN294667

Canola

2

 

61-15C

 

B. simplex

97

KM817231.1

MN294668

Canola

2

 

16-14W

 

B. thuringiensis

97

CP004870.1

MN294625

Wheat

1

 

19-14A

 

B. thuringiensis

99

KX592862.1

MN294628

Alfalfa

1

 

25-14A

 

B. thuringiensis

97

KU179338.1

MN294633

Alfalfa

1

 

38-14C

 

B. thuringiensis

95

JF895480.1

MN294645

Canola

1

 

28-14SL

Fictibacillus

F. arsenicus

98

CP016761.1

MN294636

Soil

1

 

2-14SY

Psychrobacillus

P. psychrodurans

95

KC618486.1

MN294614

Soybean

1

 

27-14SL

 

P. psychrodurans

95

KP334978.1

MN294635

Soil

1

 

35-14C

 

P. soli

100

MH934924.1

MN294642

Canola

1

Proteobacteria (14%)1

24-14A

Pseudomonas

P. baetica

85

KY963434.1

MN294632

Alfalfa

1

6-14SY

 

P. fluorescens

99

CP015225.1

MN294617

Soybean

1

 

8-14SY

 

P. moorei

96

FM955889.1

MN294618

Soybean

1

 

29-14SL

 

P. mosselii

98

CP024159.1

MN294637

Soil

1

 

15-14W

 

P. putida

96

KJ819580.1

MN294624

Wheat

1

 

10-14W

Rheinheimera

R. soli strain

99

KU597256.1

MN294620

Wheat

1

 

31-14SL

Serratia

S. fonticola

96

CP013913.1

MN294638

Soil

1

 

54-15A

Stenotrophomonas

S. maltophilia

96

MK641655.1

MN294661

Alfalfa

2

 

63-15C

 

S. maltophilia

99

JN705917.1

MN294670

Canola

2

 

64-15C

 

S. maltophilia

98

CP033829.1

MN294671

Canola

2

  1. aProportions of Phyla groups
  2. bDPB DNase-producing bacteria
  3. cPercent identity match of sequence based on the NCBI database
  4. dExperiment
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Annals of Microbiology

ISSN: 1869-2044

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