Table 2 The communities identified from the co-fitness protein network in this study and the corresponding GO molecular functions
Community | Proteins | p value | Benjamini | GO molecular function |
|---|---|---|---|---|
1 | 30 | 2.16E-08 | 4.96E-07 | Heme binding |
9.40E-05 | 0.001080277 | Iron ion binding | ||
0.001139293 | 0.008701481 | Electron carrier activity | ||
0.002121235 | 0.012135814 | Cytochrome-c oxidase activity | ||
0.022744537 | 0.100425179 | NADH dehydrogenase (ubiquinone) activity | ||
2 | 22 | 0.00970885 | 0.35 | Flavin adenine dinucleotide binding |
3 | 20 | 4.88E-04 | 0.018387353 | Sulfate transmembrane-transporting ATPase activity |
0.004176498 | 0.076440107 | Pyridoxal phosphate binding | ||
4 | 29 | 3.35E-10 | 4.03E-09 | Signal transducer activity |
3.40E-05 | 2.04E-04 | Receptor activity | ||
1.84E-04 | 7.37E-04 | Structural molecule activity | ||
5 | 16 | 2.21E-07 | 1.76E-06 | Phosphorelay response regulator activity |
1.99E-05 | 7.95E-05 | Phosphorelay sensor kinase activity | ||
0.009690909 | 0.025634178 | DNA binding | ||
6 | 16 | —— | —— | No statistically significant result |
7 | 10 | 6.91E-05 | 3.45E-04 | NADH dehydrogenase (ubiquinone) activity |
0.001796762 | 0.004485852 | Succinate dehydrogenase activity | ||
0.001796762 | 0.004485852 | FMN binding | ||
8 | 42 | 8.54E-08 | 2.65E-06 | Electron carrier activity |
6.22E-05 | 9.63E-04 | Metal ion binding | ||
9 | 11 | 0.001306437 | 0.02197882 | Catalytic activity |
0.001306437 | 0.02197882 | Heme transporter activity | ||
0.016843589 | 0.134449855 | Protein disulfide oxidoreductase activity | ||
10 | 3 | 0.022988506 | 0.022988506 | Diguanylate cyclase activity |
11 | 4 | —— | —— | No statistically significant result |