Table 4 Primers for phylogenetic classification of E. coli
Gene | Primer sequence (5’-3’) | Size of Product (bp) | References |
|---|---|---|---|
chuA | F: GAC GAA CCA ACG GTC AGG AT | 279 | (Clermont et al. 2000) |
R: TGC CGC CAG TAC CAA AGA CA | |||
yjaA | F: TGA AGT GTC AGG AGA CGC TG | 211 | (Clermont et al. 2000) |
R: ATG GAG AAT GCG TTC CTC AAC | |||
TSECP4C2 | F: GAG TAA TGT CGG GGC ATT CA | 152 | (Clermont et al. 2000) |
R: CGC GCC AAC AAA GTA TTA CG |